IL_6UZ7_117
3D structure
- PDB id
- 6UZ7 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- K.lactis 80S ribosome with p/PE tRNA and eIF5B
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.6 Å
Loop
- Sequence
- GAGGUAA*UAAAUAU
- Length
- 14 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6UZ7_117 not in the Motif Atlas
- Geometric match to IL_5TBW_038
- Geometric discrepancy: 0.0978
- The information below is about IL_5TBW_038
- Detailed Annotation
- 7x7 Sarcin-Ricin with intercalated A; G-bulge
- Broad Annotation
- Sarcin-Ricin; G-bulge
- Motif group
- IL_93830.3
- Basepair signature
- cWW-cWW-L-R-cSH-R-tWH-tHS-cWW
- Number of instances in this motif group
- 4
Unit IDs
6UZ7|1|5|G|962
6UZ7|1|5|A|963
6UZ7|1|5|G|964
6UZ7|1|5|G|965
6UZ7|1|5|U|966
6UZ7|1|5|A|967
6UZ7|1|5|A|968
*
6UZ7|1|5|U|1023
6UZ7|1|5|A|1024
6UZ7|1|5|A|1025
6UZ7|1|5|A|1026
6UZ7|1|5|U|1027
6UZ7|1|5|A|1028
6UZ7|1|5|U|1029
Current chains
- Chain 5
- 25S ribosomal RNA
Nearby chains
- Chain 7
- 5S ribosomal RNA; 5S rRNA
- Chain AF
- KLLA0D03410p
- Chain AI
- KLLA0D05643p
- Chain AT
- KLLA0E23651p
Coloring options: