IL_6UZ7_127
3D structure
- PDB id
- 6UZ7 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- K.lactis 80S ribosome with p/PE tRNA and eIF5B
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.6 Å
Loop
- Sequence
- UUAAG*CUAUA
- Length
- 10 nucleotides
- Bulged bases
- 6UZ7|1|5|U|1302
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6UZ7_127 not in the Motif Atlas
- Homologous match to IL_5TBW_048
- Geometric discrepancy: 0.1063
- The information below is about IL_5TBW_048
- Detailed Annotation
- UAA/GAN
- Broad Annotation
- No text annotation
- Motif group
- IL_89002.4
- Basepair signature
- cWW-tWH-cWW-L-cWW-tHS
- Number of instances in this motif group
- 15
Unit IDs
6UZ7|1|5|U|1138
6UZ7|1|5|U|1139
6UZ7|1|5|A|1140
6UZ7|1|5|A|1141
6UZ7|1|5|G|1142
*
6UZ7|1|5|C|1299
6UZ7|1|5|U|1300
6UZ7|1|5|A|1301
6UZ7|1|5|U|1302
6UZ7|1|5|A|1303
Current chains
- Chain 5
- 25S ribosomal RNA
Nearby chains
- Chain 7
- 5S ribosomal RNA; 5S rRNA
- Chain AF
- KLLA0D03410p
- Chain AQ
- KLLA0A07227p
- Chain Be
- KLLA0E06843p
- Chain Bf
- KLLA0D07405p
Coloring options: