IL_6UZ7_142
3D structure
- PDB id
- 6UZ7 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- K.lactis 80S ribosome with p/PE tRNA and eIF5B
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.6 Å
Loop
- Sequence
- CUAAG*CGAAAG
- Length
- 11 nucleotides
- Bulged bases
- 6UZ7|1|5|A|1557, 6UZ7|1|5|A|1558
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6UZ7_142 not in the Motif Atlas
- Homologous match to IL_5TBW_063
- Geometric discrepancy: 0.1332
- The information below is about IL_5TBW_063
- Detailed Annotation
- UAA/GAN
- Broad Annotation
- No text annotation
- Motif group
- IL_89002.4
- Basepair signature
- cWW-tWH-cWW-L-cWW-tHS
- Number of instances in this motif group
- 15
Unit IDs
6UZ7|1|5|C|1503
6UZ7|1|5|U|1504
6UZ7|1|5|A|1505
6UZ7|1|5|A|1506
6UZ7|1|5|G|1507
*
6UZ7|1|5|C|1554
6UZ7|1|5|G|1555
6UZ7|1|5|A|1556
6UZ7|1|5|A|1557
6UZ7|1|5|A|1558
6UZ7|1|5|G|1559
Current chains
- Chain 5
- 25S ribosomal RNA
Nearby chains
- Chain 8
- 5.8S ribosomal RNA; 5.8S rRNA
- Chain AA
- KLLA0D16027p
- Chain Bg
- KLLA0C08371p
- Chain Bj
- Ribosomal protein L37
- Chain Bl
- 60S ribosomal protein L39
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