IL_6UZ7_160

3D structure

PDB id

6UZ7 (explore in PDB, NAKB, or RNA 3D Hub)

Description

K.lactis 80S ribosome with p/PE tRNA and eIF5B

Experimental method

ELECTRON MICROSCOPY

Resolution

3.6 Å

Loop

Sequence

CUUG*CUUG

Length

8 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_6UZ7_160 not in the Motif Atlas

Geometric match to IL_5EW4_002

Geometric discrepancy: 0.2649

The information below is about IL_5EW4_002

Detailed Annotation

Tandem non-canonical cWW pairs

Broad Annotation

No text annotation

Motif group

IL_71194.3

Basepair signature

cWW-cWW-cWW-cWW

Number of instances in this motif group

41

Unit IDs

6UZ7|1|5|C|1933
6UZ7|1|5|U|1934
6UZ7|1|5|U|1935
6UZ7|1|5|G|1936
*
6UZ7|1|5|C|2031
6UZ7|1|5|U|2032
6UZ7|1|5|U|2033
6UZ7|1|5|G|2034

Current chains

Chain 5

25S ribosomal RNA

Nearby chains