IL_6UZ7_176
3D structure
- PDB id
- 6UZ7 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- K.lactis 80S ribosome with p/PE tRNA and eIF5B
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.6 Å
Loop
- Sequence
- GGAG*CGCCAGUGAAAUAC
- Length
- 18 nucleotides
- Bulged bases
- None detected
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6UZ7_176 not in the Motif Atlas
- Geometric match to IL_1MZP_003
- Geometric discrepancy: 0.1769
- The information below is about IL_1MZP_003
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_75283.2
- Basepair signature
- cWW-tSS-L-R-L-tHS-L-cWW-L-tWH-tWH-L-L-R
- Number of instances in this motif group
- 3
Unit IDs
6UZ7|1|5|G|2435
6UZ7|1|5|G|2436
6UZ7|1|5|A|2437
6UZ7|1|5|G|2438
*
6UZ7|1|5|C|2445
6UZ7|1|5|G|2446
6UZ7|1|5|C|2447
6UZ7|1|5|C|2448
6UZ7|1|5|A|2449
6UZ7|1|5|G|2450
6UZ7|1|5|U|2451
6UZ7|1|5|G|2452
6UZ7|1|5|A|2453
6UZ7|1|5|A|2454
6UZ7|1|5|A|2455
6UZ7|1|5|U|2456
6UZ7|1|5|A|2457
6UZ7|1|5|C|2458
Current chains
- Chain 5
- 25S ribosomal RNA
Nearby chains
- Chain 3
- Transfer RNA; tRNA
- Chain Bq
- Ribosomal protein
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