IL_6UZ7_196
3D structure
- PDB id
- 6UZ7 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- K.lactis 80S ribosome with p/PE tRNA and eIF5B
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.6 Å
Loop
- Sequence
- CUUAGUAC*GGAACAG
- Length
- 15 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6UZ7_196 not in the Motif Atlas
- Homologous match to IL_5TBW_116
- Geometric discrepancy: 0.1218
- The information below is about IL_5TBW_116
- Detailed Annotation
- 8x7 Sarcin-Ricin; G-bulge
- Broad Annotation
- Sarcin-Ricin; G-bulge
- Motif group
- IL_04346.8
- Basepair signature
- cWW-cWW-tSH-tHH-cSH-tWH-tHS-cWW
- Number of instances in this motif group
- 15
Unit IDs
6UZ7|1|5|C|2986
6UZ7|1|5|U|2987
6UZ7|1|5|U|2988
6UZ7|1|5|A|2989
6UZ7|1|5|G|2990
6UZ7|1|5|U|2991
6UZ7|1|5|A|2992
6UZ7|1|5|C|2993
*
6UZ7|1|5|G|2998
6UZ7|1|5|G|2999
6UZ7|1|5|A|3000
6UZ7|1|5|A|3001
6UZ7|1|5|C|3002
6UZ7|1|5|A|3003
6UZ7|1|5|G|3004
Current chains
- Chain 5
- 25S ribosomal RNA
Nearby chains
- Chain 1
- KLLA0F23265p
- Chain AB
- 60S ribosomal protein L3
- Chain AH
- KLLA0F04499p
- Chain AV
- KLLA0E06997p
- Chain Bm
- Ubiquitin fusion protein
Coloring options: