IL_6UZ7_209

3D structure

PDB id

6UZ7 (explore in PDB, NAKB, or RNA 3D Hub)

Description

K.lactis 80S ribosome with p/PE tRNA and eIF5B

Experimental method

ELECTRON MICROSCOPY

Resolution

3.6 Å

Loop

Sequence

GUA*UUAAGC

Length

9 nucleotides

Bulged bases

6UZ7|1|5|G|3345

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_6UZ7_209 not in the Motif Atlas

Homologous match to IL_8C3A_138

Geometric discrepancy: 0.1335

The information below is about IL_8C3A_138

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_84428.1

Basepair signature

cWW-cWW-L-cWW-L

Number of instances in this motif group

2

Unit IDs

6UZ7|1|5|G|3296
6UZ7|1|5|U|3297
6UZ7|1|5|A|3298
*
6UZ7|1|5|U|3341
6UZ7|1|5|U|3342
6UZ7|1|5|A|3343
6UZ7|1|5|A|3344
6UZ7|1|5|G|3345
6UZ7|1|5|C|3346

Current chains

Chain 5

25S ribosomal RNA

Nearby chains

Chain AB

60S ribosomal protein L3

Chain AW

60S ribosomal protein L24

Chain Bd

KLLA0B02937p