Motif IL_84428.1 Version IL_84428.1 of this group appears in releases 3.89 to 3.90
| #S | Loop id | PDB | Disc | #Non-core | Annotation | Chain(s) | Standardized name | 1 | 2 | 3 | 4 | 5 | break | 6 | 7 | 8 | 1-8 | 2-7 | 5-6 | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | IL_5TBW_132 | 5TBW | 0.0000 | 1 | Isolated non-canonical cWW pair | 1 | LSU rRNA | U | 3373 | U | 3374 | A | 3375 | A | 3376 | C | 3378 | * | G | 3328 | U | 3329 | A | 3330 | cWW | cwW | cWW |
| 2 | IL_8C3A_138 | 8C3A | 0.0884 | 1 | Isolated non-canonical cWW pair (H) | 1 | LSU rRNA | U | 3338 | U | 3339 | A | 3340 | A | 3341 | C | 3343 | * | G | 3293 | U | 3294 | A | 3295 | cWW | cwW | cWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| UUAAGC*GUA | 2 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| UAAG*U | 2 |
- Annotations
-
- Isolated non-canonical cWW pair (1)
- Isolated non-canonical cWW pair (H) (1)
- Basepair signature
- cWW-cWW-L-cWW-L
- Heat map statistics
- Min 0.09 | Avg 0.04 | Max 0.09
Coloring options: