IL_6UZ7_229
3D structure
- PDB id
- 6UZ7 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- K.lactis 80S ribosome with p/PE tRNA and eIF5B
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.6 Å
Loop
- Sequence
- UGCAUGG*UCUGUGAUG
- Length
- 16 nucleotides
- Bulged bases
- 6UZ7|1|2|C|1273, 6UZ7|1|2|U|1430, 6UZ7|1|2|G|1433
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6UZ7_229 not in the Motif Atlas
- Homologous match to IL_8P9A_439
- Geometric discrepancy: 0.1572
- The information below is about IL_8P9A_439
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_99893.2
- Basepair signature
- cWW-tHS-tWH-cWH-cWW-L-L-cWW
- Number of instances in this motif group
- 3
Unit IDs
6UZ7|1|2|U|1271
6UZ7|1|2|G|1272
6UZ7|1|2|C|1273
6UZ7|1|2|A|1274
6UZ7|1|2|U|1275
6UZ7|1|2|G|1276
6UZ7|1|2|G|1277
*
6UZ7|1|2|U|1428
6UZ7|1|2|C|1429
6UZ7|1|2|U|1430
6UZ7|1|2|G|1431
6UZ7|1|2|U|1432
6UZ7|1|2|G|1433
6UZ7|1|2|A|1434
6UZ7|1|2|U|1435
6UZ7|1|2|G|1436
Current chains
- Chain 2
- 18S ribosomal RNA
Nearby chains
- Chain D
- KLLA0D08305p
- Chain K
- KLLA0B08173p
- Chain U
- KLLA0F25542p
- Chain d
- 40S ribosomal protein S29
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