IL_6V3B_185

3D structure

PDB id

6V3B (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of the Acinetobacter baumannii Ribosome: 70S in Empty state

Experimental method

ELECTRON MICROSCOPY

Resolution

2.91 Å

Loop

Sequence

UG*CUUCAG

Length

8 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_6V3B_185 not in the Motif Atlas

Homologous match to IL_9DFE_053

Geometric discrepancy: 0.5869

The information below is about IL_9DFE_053

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_52564.1

Basepair signature

cWW-L-cWW-L

Number of instances in this motif group

2

Unit IDs

6V3B|1|AN1|U|1410
6V3B|1|AN1|G|1411
*
6V3B|1|AN1|C|1580
6V3B|1|AN1|U|1581
6V3B|1|AN1|U|1582
6V3B|1|AN1|C|1583
6V3B|1|AN1|A|1584
6V3B|1|AN1|G|1585

Current chains

Chain AN1

23s ribosomal RNA

Nearby chains