IL_6W6L_122
3D structure
- PDB id
- 6W6L (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of the human ribosome-TMCO1 translocon
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.84 Å
Loop
- Sequence
- GCGG*UAC
- Length
- 7 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6W6L_122 not in the Motif Atlas
- Homologous match to IL_8C3A_096
- Geometric discrepancy: 0.0842
- The information below is about IL_8C3A_096
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_63450.5
- Basepair signature
- cWW-cHS-cWW-cWW-cWW
- Number of instances in this motif group
- 7
Unit IDs
6W6L|1|t|G|3866
6W6L|1|t|C|3867
6W6L|1|t|G|3868
6W6L|1|t|G|3869
*
6W6L|1|t|U|4525
6W6L|1|t|A|4526
6W6L|1|t|C|4527
Current chains
- Chain t
- 28S ribosomal RNA
Nearby chains
- Chain B
- 60S ribosomal protein L3
- Chain P
- 60S ribosomal protein L13a
Coloring options: