IL_6W6L_127
3D structure
- PDB id
- 6W6L (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of the human ribosome-TMCO1 translocon
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.84 Å
Loop
- Sequence
- GUGAGGC*GCUC
- Length
- 11 nucleotides
- Bulged bases
- 6W6L|1|t|G|4054, 6W6L|1|t|C|4124, 6W6L|1|t|U|4125
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6W6L_127 not in the Motif Atlas
- Homologous match to IL_5TBW_096
- Geometric discrepancy: 0.2168
- The information below is about IL_5TBW_096
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_74114.1
- Basepair signature
- cWW-cWS-cWW-L-R
- Number of instances in this motif group
- 2
Unit IDs
6W6L|1|t|G|4052
6W6L|1|t|U|4053
6W6L|1|t|G|4054
6W6L|1|t|A|4055
6W6L|1|t|G|4056
6W6L|1|t|G|4057
6W6L|1|t|C|4058
*
6W6L|1|t|G|4123
6W6L|1|t|C|4124
6W6L|1|t|U|4125
6W6L|1|t|C|4126
Current chains
- Chain t
- 28S ribosomal RNA
Nearby chains
- Chain A
- 60S ribosomal protein L8
- Chain D
- 5.8S ribosomal RNA; 5.8S rRNA
- Chain I
- 60S ribosomal protein L7a
- Chain Y
- 60S ribosomal protein L23a
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