IL_6W6P_036
3D structure
- PDB id
- 6W6P (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- MultiBody Refinement of 70S Ribosome from Enterococcus faecalis
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.9 Å
Loop
- Sequence
- UCCCAAAA*UA
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6W6P_036 not in the Motif Atlas
- Geometric match to IL_5J7L_278
- Geometric discrepancy: 0.1086
- The information below is about IL_5J7L_278
- Detailed Annotation
- SSU/LSU pseudoknot
- Broad Annotation
- No text annotation
- Motif group
- IL_41203.4
- Basepair signature
- cWW-L-cWW-L-L-R-cSH
- Number of instances in this motif group
- 11
Unit IDs
6W6P|1|A|U|1044
6W6P|1|A|C|1045
6W6P|1|A|C|1046
6W6P|1|A|C|1047
6W6P|1|A|A|1048
6W6P|1|A|A|1049
6W6P|1|A|A|1050
6W6P|1|A|A|1051
*
6W6P|1|A|U|1190
6W6P|1|A|A|1191
Current chains
- Chain A
- 23S rRNA
Nearby chains
- Chain K
- 50S ribosomal protein L13
- Chain R
- 50S ribosomal protein L20
Coloring options: