IL_6W6P_054

3D structure

PDB id

6W6P (explore in PDB, NAKB, or RNA 3D Hub)

Description

MultiBody Refinement of 70S Ribosome from Enterococcus faecalis

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

CAAG*UGACG

Length

9 nucleotides

Bulged bases

6W6P|1|A|C|1567

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_6W6P_054 not in the Motif Atlas

Homologous match to IL_5J7L_299

Geometric discrepancy: 0.1541

The information below is about IL_5J7L_299

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_68574.4

Basepair signature

cWW-tHH-tHS-cWW

Number of instances in this motif group

3

Unit IDs

6W6P|1|A|C|1511
6W6P|1|A|A|1512
6W6P|1|A|A|1513
6W6P|1|A|G|1514
*
6W6P|1|A|U|1564
6W6P|1|A|G|1565
6W6P|1|A|A|1566
6W6P|1|A|C|1567
6W6P|1|A|G|1568

Current chains

Chain A

23S rRNA

Nearby chains