IL_6W6P_137

3D structure

PDB id

6W6P (explore in PDB, NAKB, or RNA 3D Hub)

Description

MultiBody Refinement of 70S Ribosome from Enterococcus faecalis

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

GGGAG*UC

Length

7 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_6W6P_137 not in the Motif Atlas

Homologous match to IL_5J7L_036

Geometric discrepancy: 0.0958

The information below is about IL_5J7L_036

Detailed Annotation

Left turn

Broad Annotation

Left turn

Motif group

IL_29346.2

Basepair signature

cWW-L-cWW-L-L

Number of instances in this motif group

3

Unit IDs

6W6P|1|a|G|789
6W6P|1|a|G|790
6W6P|1|a|G|791
6W6P|1|a|A|792
6W6P|1|a|G|793
*
6W6P|1|a|U|819
6W6P|1|a|C|820

Current chains

Chain a

16S rRNA

Nearby chains

Chain C

50S ribosomal protein L2

Chain k

30S ribosomal protein S11