IL_6W6P_158

3D structure

PDB id

6W6P (explore in PDB, NAKB, or RNA 3D Hub)

Description

MultiBody Refinement of 70S Ribosome from Enterococcus faecalis

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

CCG*CAAG

Length

7 nucleotides

Bulged bases

6W6P|1|a|C|1415, 6W6P|1|a|A|1519

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_6W6P_158 not in the Motif Atlas

Homologous match to IL_5J7L_058

Geometric discrepancy: 0.1491

The information below is about IL_5J7L_058

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_61438.4

Basepair signature

cWW-L-cWW

Number of instances in this motif group

4

Unit IDs

6W6P|1|a|C|1414
6W6P|1|a|C|1415
6W6P|1|a|G|1416
*
6W6P|1|a|C|1517
6W6P|1|a|A|1518
6W6P|1|a|A|1519
6W6P|1|a|G|1520

Current chains

Chain a

16S rRNA

Nearby chains