IL_6W77_036

3D structure

PDB id

6W77 (explore in PDB, NAKB, or RNA 3D Hub)

Description

30S-Inactivated-high-Mg2+ Class A

Experimental method

ELECTRON MICROSCOPY

Resolution

3.6 Å

Loop

Sequence

GGGAG*UC

Length

7 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_6W77_036 not in the Motif Atlas

Homologous match to IL_5J7L_036

Geometric discrepancy: 0.1375

The information below is about IL_5J7L_036

Detailed Annotation

Left turn

Broad Annotation

Left turn

Motif group

IL_29346.2

Basepair signature

cWW-L-cWW-L-L

Number of instances in this motif group

3

Unit IDs

6W77|1|A|G|774
6W77|1|A|G|775
6W77|1|A|G|776
6W77|1|A|A|777
6W77|1|A|G|778
*
6W77|1|A|U|804
6W77|1|A|C|805

Current chains

Chain A

RNA (1519-MER)

Nearby chains

Chain K

30S ribosomal protein S11