IL_6W7M_014
3D structure
- PDB id
- 6W7M (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 30S-Inactive-high-Mg2+ + carbon layer
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.8 Å
Loop
- Sequence
- GAUUAG*CGACGAUC
- Length
- 14 nucleotides
- Bulged bases
- 6W7M|1|A|U|244, 6W7M|1|A|C|280
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6W7M_014 not in the Motif Atlas
- Geometric match to IL_4V88_402
- Geometric discrepancy: 0.2783
- The information below is about IL_4V88_402
- Detailed Annotation
- Kink-turn with non-sequential stacking
- Broad Annotation
- Kink-turn
- Motif group
- IL_45067.5
- Basepair signature
- cWW-tSH-tSS-tHS-R-cWW-cWW-R
- Number of instances in this motif group
- 16
Unit IDs
6W7M|1|A|G|242
6W7M|1|A|A|243
6W7M|1|A|U|244
6W7M|1|A|U|245
6W7M|1|A|A|246
6W7M|1|A|G|247
*
6W7M|1|A|C|277
6W7M|1|A|G|278
6W7M|1|A|A|279
6W7M|1|A|C|280
6W7M|1|A|G|281
6W7M|1|A|A|282
6W7M|1|A|U|283
6W7M|1|A|C|284
Current chains
- Chain A
- 16S rRNA
Nearby chains
- Chain L
- 30S ribosomal protein S12
- Chain Q
- 30S ribosomal protein S17
Coloring options: