IL_6W7N_035

3D structure

PDB id

6W7N (explore in PDB, NAKB, or RNA 3D Hub)

Description

30S-Inactive-low-Mg2+ Class A

Experimental method

ELECTRON MICROSCOPY

Resolution

3.4 Å

Loop

Sequence

AGAAUU*AGGAAU

Length

12 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_6W7N_035 not in the Motif Atlas

Homologous match to IL_4LFB_030

Geometric discrepancy: 0.1247

The information below is about IL_4LFB_030

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_04668.2

Basepair signature

cWW-cWW-cWW-L-R-L-R-cWW

Number of instances in this motif group

8

Unit IDs

6W7N|1|A|A|673
6W7N|1|A|G|674
6W7N|1|A|A|675
6W7N|1|A|A|676
6W7N|1|A|U|677
6W7N|1|A|U|678
*
6W7N|1|A|A|712
6W7N|1|A|G|713
6W7N|1|A|G|714
6W7N|1|A|A|715
6W7N|1|A|A|716
6W7N|1|A|U|717

Current chains

Chain A

16S rRNA

Nearby chains