IL_6W7N_059

3D structure

PDB id

6W7N (explore in PDB, NAKB, or RNA 3D Hub)

Description

30S-Inactive-low-Mg2+ Class A

Experimental method

ELECTRON MICROSCOPY

Resolution

3.4 Å

Loop

Sequence

UUGC*GCA

Length

7 nucleotides

Bulged bases

6W7N|1|A|U|368

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_6W7N_059 not in the Motif Atlas

Geometric match to IL_8E4X_001

Geometric discrepancy: 0.2329

The information below is about IL_8E4X_001

Detailed Annotation

Isolated non-canonical cWW pair

Broad Annotation

No text annotation

Motif group

IL_10289.2

Basepair signature

cWW-cWW-cWW

Number of instances in this motif group

237

Unit IDs

6W7N|1|A|U|367
6W7N|1|A|U|368
6W7N|1|A|G|369
6W7N|1|A|C|370
*
6W7N|1|A|G|391
6W7N|1|A|C|392
6W7N|1|A|A|393

Current chains

Chain A

16S rRNA

Nearby chains

Chain P

30S ribosomal protein S16