IL_6W7W_027

3D structure

PDB id

6W7W (explore in PDB, NAKB, or RNA 3D Hub)

Description

30S-Inactive-low-Mg2+ Class B

Experimental method

ELECTRON MICROSCOPY

Resolution

3.9 Å

Loop

Sequence

CGUAAAG*CG

Length

9 nucleotides

Bulged bases

6W7W|1|2|A|572

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_6W7W_027 not in the Motif Atlas

Homologous match to IL_6CZR_134

Geometric discrepancy: 0.1728

The information below is about IL_6CZR_134

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_38186.5

Basepair signature

cWW-L-cWW-L-L-R

Number of instances in this motif group

5

Unit IDs

6W7W|1|2|C|569
6W7W|1|2|G|570
6W7W|1|2|U|571
6W7W|1|2|A|572
6W7W|1|2|A|573
6W7W|1|2|A|574
6W7W|1|2|G|575
*
6W7W|1|2|C|880
6W7W|1|2|G|881

Current chains

Chain 2

16S rRNA

Nearby chains

Chain G

30S ribosomal protein S8

Chain K

30S ribosomal protein S12

Chain P

30S ribosomal protein S17