IL_6W7W_037

3D structure

PDB id

6W7W (explore in PDB, NAKB, or RNA 3D Hub)

Description

30S-Inactive-low-Mg2+ Class B

Experimental method

ELECTRON MICROSCOPY

Resolution

3.9 Å

Loop

Sequence

CAAAC*GGUAG

Length

10 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_6W7W_037 not in the Motif Atlas

Homologous match to IL_6CZR_145

Geometric discrepancy: 0.3114

The information below is about IL_6CZR_145

Detailed Annotation

tSH-tHW-tHS

Broad Annotation

No text annotation

Motif group

IL_17136.6

Basepair signature

cWW-tSH-tHW-tHS-cWW

Number of instances in this motif group

16

Unit IDs

6W7W|1|2|C|779
6W7W|1|2|A|780
6W7W|1|2|A|781
6W7W|1|2|A|782
6W7W|1|2|C|783
*
6W7W|1|2|G|799
6W7W|1|2|G|800
6W7W|1|2|U|801
6W7W|1|2|A|802
6W7W|1|2|G|803

Current chains

Chain 2

16S rRNA

Nearby chains