IL_6WDB_131
3D structure
- PDB id
- 6WDB (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure IV-A)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4 Å
Loop
- Sequence
- CAG*CAGAAG
- Length
- 9 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6WDB_131 not in the Motif Atlas
- Homologous match to IL_5J7L_021
- Geometric discrepancy: 0.1414
- The information below is about IL_5J7L_021
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_33323.1
- Basepair signature
- cWW-L-R-L-cWW-L-L
- Number of instances in this motif group
- 2
Unit IDs
6WDB|1|3|C|440
6WDB|1|3|A|441
6WDB|1|3|G|442
*
6WDB|1|3|C|492
6WDB|1|3|A|493
6WDB|1|3|G|494
6WDB|1|3|A|495
6WDB|1|3|A|496
6WDB|1|3|G|497
Current chains
- Chain 3
- 16S ribosomal RNA
Nearby chains
- Chain I
- 30S ribosomal protein S4
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