IL_6WDE_135
3D structure
- PDB id
- 6WDE (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure V-B)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3 Å
Loop
- Sequence
- CGUAAAG*CG
- Length
- 9 nucleotides
- Bulged bases
- 6WDE|1|3|A|572
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6WDE_135 not in the Motif Atlas
- Homologous match to IL_4LFB_022
- Geometric discrepancy: 0.1096
- The information below is about IL_4LFB_022
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_20847.1
- Basepair signature
- cWW-L-cWW-L-L-R
- Number of instances in this motif group
- 5
Unit IDs
6WDE|1|3|C|569
6WDE|1|3|G|570
6WDE|1|3|U|571
6WDE|1|3|A|572
6WDE|1|3|A|573
6WDE|1|3|A|574
6WDE|1|3|G|575
*
6WDE|1|3|C|880
6WDE|1|3|G|881
Current chains
- Chain 3
- 16S ribosomal RNA
Nearby chains
- Chain Q
- 30S ribosomal protein S12
- Chain V
- 30S ribosomal protein S17
Coloring options: