IL_6WNT_110
3D structure
- PDB id
- 6WNT (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 50S ribosomal subunit without free 5S rRNA and perturbed PTC
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.1 Å
Loop
- Sequence
- UUAAUUGAUG*UUGAUCGAAG
- Length
- 20 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6WNT_110 not in the Motif Atlas
- Geometric match to IL_5J7L_387
- Geometric discrepancy: 0.1202
- The information below is about IL_5J7L_387
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_61249.1
- Basepair signature
- cWW-L-R-L-R-tHS-cWW-cWW-tSH-tHS-cWW-cWW
- Number of instances in this motif group
- 1
Unit IDs
6WNT|1|4|U|1979
6WNT|1|4|U|1980
6WNT|1|4|A|1981
6WNT|1|4|A|1982
6WNT|1|4|U|1983
6WNT|1|4|U|1984
6WNT|1|4|G|1985
6WNT|1|4|A|1986
6WNT|1|4|U|1987
6WNT|1|4|G|1988
*
6WNT|1|4|U|2010
6WNT|1|4|U|2011
6WNT|1|4|G|2012
6WNT|1|4|A|2013
6WNT|1|4|U|2014
6WNT|1|4|C|2015
6WNT|1|4|G|2016
6WNT|1|4|A|2017
6WNT|1|4|A|2018
6WNT|1|4|G|2019
Current chains
- Chain 4
- 23s-5s joint ribosomal RNA
Nearby chains
- Chain a
- 50S ribosomal protein L1
Coloring options: