IL_6WOO_069
3D structure
- PDB id
- 6WOO (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- CryoEM structure of yeast 80S ribosome with Met-tRNAiMet, eIF5B, and GDP
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.9 Å
Loop
- Sequence
- CUA*UGGAAG
- Length
- 9 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6WOO_069 not in the Motif Atlas
- Homologous match to IL_8C3A_465
- Geometric discrepancy: 0.1651
- The information below is about IL_8C3A_465
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_76236.1
- Basepair signature
- cWW-tWH-R-L-cWW-L-L
- Number of instances in this motif group
- 2
Unit IDs
6WOO|1|2|C|1389
6WOO|1|2|U|1390
6WOO|1|2|A|1391
*
6WOO|1|2|U|1407
6WOO|1|2|G|1408
6WOO|1|2|G|1409
6WOO|1|2|A|1410
6WOO|1|2|A|1411
6WOO|1|2|G|1412
Current chains
- Chain 2
- 18S ribosomal RNA
Nearby chains
- Chain FF
- uS7
- Chain QQ
- uS19
- Chain RR
- eS17
- Chain gg
- RACK1
Coloring options: