IL_6WOO_074
3D structure
- PDB id
- 6WOO (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- CryoEM structure of yeast 80S ribosome with Met-tRNAiMet, eIF5B, and GDP
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.9 Å
Loop
- Sequence
- CCG*CAAG
- Length
- 7 nucleotides
- Bulged bases
- 6WOO|1|2|C|1637, 6WOO|1|2|A|1766
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6WOO_074 not in the Motif Atlas
- Geometric match to IL_4V88_463
- Geometric discrepancy: 0.1039
- The information below is about IL_4V88_463
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_61438.1
- Basepair signature
- cWW-L-cWW
- Number of instances in this motif group
- 5
Unit IDs
6WOO|1|2|C|1636
6WOO|1|2|C|1637
6WOO|1|2|G|1638
*
6WOO|1|2|C|1764
6WOO|1|2|A|1765
6WOO|1|2|A|1766
6WOO|1|2|G|1767
Current chains
- Chain 2
- 18S ribosomal RNA
Nearby chains
- Chain 3
- Transfer RNA; tRNA
- Chain 4
- mRNA
- Chain OO
- uS11
- Chain aa
- eS26
- Chain n
- eL41
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