IL_6WOO_152
3D structure
- PDB id
- 6WOO (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- CryoEM structure of yeast 80S ribosome with Met-tRNAiMet, eIF5B, and GDP
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.9 Å
Loop
- Sequence
- UCUUC*GGAAUA
- Length
- 11 nucleotides
- Bulged bases
- 6WOO|1|5|U|1815
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6WOO_152 not in the Motif Atlas
- Geometric match to IL_5TBW_066
- Geometric discrepancy: 0.2748
- The information below is about IL_5TBW_066
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_48431.1
- Basepair signature
- cWW-L-R-L-R-L-cWW
- Number of instances in this motif group
- 2
Unit IDs
6WOO|1|5|U|1627
6WOO|1|5|C|1628
6WOO|1|5|U|1629
6WOO|1|5|U|1630
6WOO|1|5|C|1631
*
6WOO|1|5|G|1811
6WOO|1|5|G|1812
6WOO|1|5|A|1813
6WOO|1|5|A|1814
6WOO|1|5|U|1815
6WOO|1|5|A|1816
Current chains
- Chain 5
- 25S ribosomal RNA
Nearby chains
- Chain Z
- eL27
Coloring options: