IL_6XA1_023

3D structure

PDB id

6XA1 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of a drug-like compound stalled human translation termination complex

Experimental method

ELECTRON MICROSCOPY

Resolution

2.8 Å

Loop

Sequence

AUUCAAC*GCGCAUUU

Length

15 nucleotides

Bulged bases

6XA1|1|L5|U|458, 6XA1|1|L5|U|678

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6XA1|1|L5|A|457
6XA1|1|L5|U|458
6XA1|1|L5|U|459
6XA1|1|L5|C|460
6XA1|1|L5|A|461
6XA1|1|L5|A|462
6XA1|1|L5|C|463
*
6XA1|1|L5|G|673
6XA1|1|L5|C|674
6XA1|1|L5|G|675
6XA1|1|L5|C|676
6XA1|1|L5|A|677
6XA1|1|L5|U|678
6XA1|1|L5|U|679
6XA1|1|L5|U|680

Current chains

Chain L5

28S rRNA

Nearby chains

Chain LE

60S ribosomal protein L6

Chain Lr

60S ribosomal protein L28