IL_6XE0_050
3D structure
- PDB id
- 6XE0 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of NusG-CTD bound to 70S ribosome (30S: NusG-CTD fragment)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 6.8 Å
Loop
- Sequence
- GUC*GUC
- Length
- 6 nucleotides
- Bulged bases
- None detected
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6XE0_050 not in the Motif Atlas
- Homologous match to IL_4LFB_047
- Geometric discrepancy: 0.1592
- The information below is about IL_4LFB_047
- Detailed Annotation
- Isolated non-canonical cWW pair
- Broad Annotation
- No text annotation
- Motif group
- IL_68118.3
- Basepair signature
- cWW-cWW-cWW
- Number of instances in this motif group
- 29
Unit IDs
6XE0|1|W|G|1061
6XE0|1|W|U|1062
6XE0|1|W|C|1063
*
6XE0|1|W|G|1193
6XE0|1|W|U|1194
6XE0|1|W|C|1195
Current chains
- Chain W
- 16s rRNA
Nearby chains
- Chain B
- 30S ribosomal protein S3
- Chain D
- 30S ribosomal protein S5
- Chain I
- 30S ribosomal protein S10
- Chain M
- 30S ribosomal protein S14
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