IL_6XE0_067
3D structure
- PDB id
- 6XE0 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of NusG-CTD bound to 70S ribosome (30S: NusG-CTD fragment)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 6.8 Å
Loop
- Sequence
- GUC*GAUAC
- Length
- 8 nucleotides
- Bulged bases
- None detected
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6XE0_067 not in the Motif Atlas
- Homologous match to IL_6CZR_361
- Geometric discrepancy: 0.1975
- The information below is about IL_6CZR_361
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_56539.1
- Basepair signature
- cWW-cWW-cSH-cWW-L
- Number of instances in this motif group
- 4
Unit IDs
6XE0|1|W|G|597
6XE0|1|W|U|598
6XE0|1|W|C|599
*
6XE0|1|W|G|639
6XE0|1|W|A|640
6XE0|1|W|U|641
6XE0|1|W|A|642
6XE0|1|W|C|643
Current chains
- Chain W
- 16s rRNA
Nearby chains
- Chain G
- 30S ribosomal protein S8
- Chain Q
- 30S ribosomal protein S17
Coloring options: