IL_6XHV_143
3D structure
- PDB id
- 6XHV (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of the A2058-dimethylated Thermus thermophilus 70S ribosome in complex with mRNA, aminoacylated A- and P-site tRNAs, and deacylated E-site tRNA at 2.40A resolution
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 2.4 Å
Loop
- Sequence
- GGAAUU*AGGAAC
- Length
- 12 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6XHV_143 not in the Motif Atlas
- Geometric match to IL_5J7L_034
- Geometric discrepancy: 0.0582
- The information below is about IL_5J7L_034
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_04668.2
- Basepair signature
- cWW-cWW-cWW-L-R-L-R-cWW
- Number of instances in this motif group
- 8
Unit IDs
6XHV|1|1a|G|673
6XHV|1|1a|G|674
6XHV|1|1a|A|675
6XHV|1|1a|A|676
6XHV|1|1a|U|677
6XHV|1|1a|U|678
*
6XHV|1|1a|A|712
6XHV|1|1a|G|713
6XHV|1|1a|G|714
6XHV|1|1a|A|715
6XHV|1|1a|A|716
6XHV|1|1a|C|717
Current chains
- Chain 1a
- 16S Ribosomal RNA
Nearby chains
- Chain 1D
- 50S ribosomal protein L2
- Chain 1f
- 30S ribosomal protein S6
- Chain 1k
- 30S ribosomal protein S11
- Chain 1r
- 30S ribosomal protein S18
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