IL_6XIQ_031
3D structure
- PDB id
- 6XIQ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM Structure of K63R Ubiquitin Mutant Ribosome under Oxidative Stress
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4.2 Å
Loop
- Sequence
- AAGC*GCU
- Length
- 7 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6XIQ_031 not in the Motif Atlas
- Geometric match to IL_5TBW_064
- Geometric discrepancy: 0.3379
- The information below is about IL_5TBW_064
- Detailed Annotation
- Other IL
- Broad Annotation
- Other IL
- Motif group
- IL_15698.1
- Basepair signature
- cWW-tSH-cSH-cWW
- Number of instances in this motif group
- 9
Unit IDs
6XIQ|1|1|A|972
6XIQ|1|1|A|973
6XIQ|1|1|G|974
6XIQ|1|1|C|975
*
6XIQ|1|1|G|1106
6XIQ|1|1|C|1107
6XIQ|1|1|U|1108
Current chains
- Chain 1
- 35S ribosomal RNA
Nearby chains
- Chain L
- 60S ribosomal protein L13-A
- Chain Q
- 60S ribosomal protein L18-A
- Chain a
- 60S ribosomal protein L28
- Chain b
- RPL29 isoform 1
Coloring options: