IL_6XYW_136
3D structure
- PDB id
- 6XYW (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the plant mitochondrial ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.86 Å
Loop
- Sequence
- CGUAG*UGGGG
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6XYW_136 not in the Motif Atlas
- Homologous match to IL_4LFB_023
- Geometric discrepancy: 0.1961
- The information below is about IL_4LFB_023
- Detailed Annotation
- tSH-tHW-tHS
- Broad Annotation
- No text annotation
- Motif group
- IL_05821.1
- Basepair signature
- cWW-tSH-tHW-tHS-cWW
- Number of instances in this motif group
- 17
Unit IDs
6XYW|1|2|C|577
6XYW|1|2|G|578
6XYW|1|2|U|579
6XYW|1|2|A|580
6XYW|1|2|G|581
*
6XYW|1|2|U|752
6XYW|1|2|G|754
6XYW|1|2|G|755
6XYW|1|2|G|756
6XYW|1|2|G|757
Current chains
- Chain 2
- RNA (1743-MER)
Nearby chains
- Chain Bg
- 40S ribosomal protein S15a-5
- Chain Bk
- Ribosomal protein S12, mitochondrial
- Chain Bn
- At1g15810/F7H2_23
- Chain Bp
- Nucleic acid-binding, OB-fold-like protein
Coloring options: