IL_6XZA_037
3D structure
- PDB id
- 6XZA (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- E. coli 70S ribosome in complex with dirithromycin, and deacylated tRNA(iMet) (focused classification).
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.66 Å
Loop
- Sequence
- CAAAC*GGUAG
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6XZA_037 not in the Motif Atlas
- Homologous match to IL_4LFB_033
- Geometric discrepancy: 0.0708
- The information below is about IL_4LFB_033
- Detailed Annotation
- tSH-tHW-tHS
- Broad Annotation
- No text annotation
- Motif group
- IL_17136.7
- Basepair signature
- cWW-tSH-tHW-tHS-cWW
- Number of instances in this motif group
- 14
Unit IDs
6XZA|1|A1|C|779
6XZA|1|A1|A|780
6XZA|1|A1|A|781
6XZA|1|A1|A|782
6XZA|1|A1|C|783
*
6XZA|1|A1|G|799
6XZA|1|A1|G|800
6XZA|1|A1|U|801
6XZA|1|A1|A|802
6XZA|1|A1|G|803
Current chains
- Chain A1
- 16S rRNA
Nearby chains
- Chain A2
- Large subunit ribosomal RNA; LSU rRNA
- Chain K1
- 30S ribosomal protein S11
- Chain U1
- 30S ribosomal protein S21
Coloring options: