IL_6XZA_163
3D structure
- PDB id
- 6XZA (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- E. coli 70S ribosome in complex with dirithromycin, and deacylated tRNA(iMet) (focused classification).
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.66 Å
Loop
- Sequence
- GAAC*G(PSU)(PSU)C
- Length
- 8 nucleotides
- Bulged bases
- None detected
- QA status
- Self-complementary:
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6XZA_163 not in the Motif Atlas
- Geometric match to IL_3WBM_002
- Geometric discrepancy: 0.3431
- The information below is about IL_3WBM_002
- Detailed Annotation
- Tandem non-canonical cWW pairs
- Broad Annotation
- No text annotation
- Motif group
- IL_85033.2
- Basepair signature
- cWW-cWW-cWW-cWW
- Number of instances in this motif group
- 35
Unit IDs
6XZA|1|A2|G|2588
6XZA|1|A2|A|2589
6XZA|1|A2|A|2590
6XZA|1|A2|C|2591
*
6XZA|1|A2|G|2603
6XZA|1|A2|PSU|2604
6XZA|1|A2|PSU|2605
6XZA|1|A2|C|2606
Current chains
- Chain A2
- 23S rRNA
Nearby chains
- Chain C2
- 50S ribosomal protein L2
- Chain f2
- Transfer RNA; tRNA
Coloring options: