IL_6XZB_063
3D structure
- PDB id
- 6XZB (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- E. coli 70S ribosome in complex with dirithromycin, fMet-Phe-tRNA(Phe) and deacylated tRNA(iMet) (focused classification).
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.54 Å
Loop
- Sequence
- AAGAAG*CCACU
- Length
- 11 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6XZB_063 not in the Motif Atlas
- Homologous match to IL_5J7L_063
- Geometric discrepancy: 0.0835
- The information below is about IL_5J7L_063
- Detailed Annotation
- Triple sheared related
- Broad Annotation
- Triple sheared
- Motif group
- IL_80231.1
- Basepair signature
- cWW-L-R-L-R-L-R-tHS-cWW
- Number of instances in this motif group
- 2
Unit IDs
6XZB|1|A1|A|1430
6XZB|1|A1|A|1431
6XZB|1|A1|G|1432
6XZB|1|A1|A|1433
6XZB|1|A1|A|1434
6XZB|1|A1|G|1435
*
6XZB|1|A1|C|1466
6XZB|1|A1|C|1467
6XZB|1|A1|A|1468
6XZB|1|A1|C|1469
6XZB|1|A1|U|1470
Current chains
- Chain A1
- 16S rRNA
Nearby chains
- Chain A2
- Large subunit ribosomal RNA; LSU rRNA
- Chain K2
- 50S ribosomal protein L14
- Chain P2
- 50S ribosomal protein L19
- Chain T1
- 30S ribosomal protein S20
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