IL_6Y2L_065

3D structure

PDB id

6Y2L (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of human ribosome in POST state

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

UUGG*UCA

Length

7 nucleotides

Bulged bases

6Y2L|1|L5|U|1757

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_6Y2L_065 not in the Motif Atlas

Geometric match to IL_5J7L_257

Geometric discrepancy: 0.1985

The information below is about IL_5J7L_257

Detailed Annotation

Isolated non-canonical cWW pair

Broad Annotation

No text annotation

Motif group

IL_07785.1

Basepair signature

cWW-cWW-cWW

Number of instances in this motif group

33

Unit IDs

6Y2L|1|L5|U|1756
6Y2L|1|L5|U|1757
6Y2L|1|L5|G|1758
6Y2L|1|L5|G|1759
*
6Y2L|1|L5|U|1773
6Y2L|1|L5|C|1774
6Y2L|1|L5|A|1775

Current chains

Chain L5

28S ribosomal RNA

Nearby chains

Chain LD

60S ribosomal protein L5

Chain LI

60S ribosomal protein L10-like