IL_6Y57_229
3D structure
- PDB id
- 6Y57 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of human ribosome in hybrid-PRE state
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.5 Å
Loop
- Sequence
- GUUAC*GUCAAC
- Length
- 11 nucleotides
- Bulged bases
- 6Y57|1|S2|C|1433
- QA status
- Missing nucleotides
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6Y57_229 not in the Motif Atlas
- Geometric match to IL_4WF9_084
- Geometric discrepancy: 0.3959
- The information below is about IL_4WF9_084
- Detailed Annotation
- Other IL
- Broad Annotation
- Other IL
- Motif group
- IL_05145.3
- Basepair signature
- cWW-cWW-cWW-cWW-cWW
- Number of instances in this motif group
- 13
Unit IDs
6Y57|1|S2|G|1406
6Y57|1|S2|U|1407
6Y57|1|S2|U|1408
6Y57|1|S2|A|1409
6Y57|1|S2|C|1410
*
6Y57|1|S2|G|1431
6Y57|1|S2|U|1432
6Y57|1|S2|C|1433
6Y57|1|S2|A|1438
6Y57|1|S2|A|1439
6Y57|1|S2|C|1440
Current chains
- Chain S2
- 18S ribosomal RNA
Nearby chains
- Chain SQ
- 40S ribosomal protein S16
- Chain SU
- 40S ribosomal protein S20
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