IL_6YLY_095
3D structure
- PDB id
- 6YLY (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- pre-60S State NE2 (TAP-Flag-Nop53)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.8 Å
Loop
- Sequence
- CGG*UUUG
- Length
- 7 nucleotides
- Bulged bases
- 6YLY|1|1|U|3382
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6YLY_095 not in the Motif Atlas
- Geometric match to IL_3C3Z_002
- Geometric discrepancy: 0.2367
- The information below is about IL_3C3Z_002
- Detailed Annotation
- Decoding loop related
- Broad Annotation
- Decoding loop related
- Motif group
- IL_29925.1
- Basepair signature
- cWW-L-R-L-cWW
- Number of instances in this motif group
- 10
Unit IDs
6YLY|1|1|C|3324
6YLY|1|1|G|3325
6YLY|1|1|G|3326
*
6YLY|1|1|U|3380
6YLY|1|1|U|3381
6YLY|1|1|U|3382
6YLY|1|1|G|3383
Current chains
- Chain 1
- 25S rRNA
Nearby chains
- Chain B
- 60S ribosomal protein L3
- Chain d
- 60S ribosomal protein L31-A
Coloring options: