IL_6YLY_114
3D structure
- PDB id
- 6YLY (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- pre-60S State NE2 (TAP-Flag-Nop53)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.8 Å
Loop
- Sequence
- AGCC*GUUGUU
- Length
- 10 nucleotides
- Bulged bases
- 6YLY|1|1|U|3354, 6YLY|1|1|U|3355
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6YLY_114 not in the Motif Atlas
- Geometric match to IL_5J7L_327
- Geometric discrepancy: 0.3776
- The information below is about IL_5J7L_327
- Detailed Annotation
- Other IL
- Broad Annotation
- Other IL
- Motif group
- IL_43644.1
- Basepair signature
- cWW-cWW-L-R-cWW
- Number of instances in this motif group
- 2
Unit IDs
6YLY|1|1|A|3347
6YLY|1|1|G|3348
6YLY|1|1|C|3349
6YLY|1|1|C|3350
*
6YLY|1|1|G|3353
6YLY|1|1|U|3354
6YLY|1|1|U|3355
6YLY|1|1|G|3356
6YLY|1|1|U|3357
6YLY|1|1|U|3358
Current chains
- Chain 1
- 25S rRNA
Nearby chains
- Chain U
- 60S ribosomal protein L22-A
Coloring options: