IL_6YTF_004

3D structure

PDB id

6YTF (explore in PDB, NAKB, or RNA 3D Hub)

Description

Acinetobacter baumannii ribosome-tigecycline complex - 30S subunit head

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

UAC*GAUA

Length

7 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_6YTF_004 not in the Motif Atlas

Geometric match to IL_4N0T_004

Geometric discrepancy: 0.3513

The information below is about IL_4N0T_004

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_99358.1

Basepair signature

cWW-L-R-L-cWW

Number of instances in this motif group

8

Unit IDs

6YTF|1|3|U|994
6YTF|1|3|A|995
6YTF|1|3|C|996
*
6YTF|1|3|G|1038
6YTF|1|3|A|1039
6YTF|1|3|U|1040
6YTF|1|3|A|1041

Current chains

Chain 3

16S ribosomal RNA

Nearby chains