IL_6YTF_004
3D structure
- PDB id
- 6YTF (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Acinetobacter baumannii ribosome-tigecycline complex - 30S subunit head
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3 Å
Loop
- Sequence
- UAC*GAUA
- Length
- 7 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6YTF_004 not in the Motif Atlas
- Geometric match to IL_4N0T_004
- Geometric discrepancy: 0.3513
- The information below is about IL_4N0T_004
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_99358.1
- Basepair signature
- cWW-L-R-L-cWW
- Number of instances in this motif group
- 8
Unit IDs
6YTF|1|3|U|994
6YTF|1|3|A|995
6YTF|1|3|C|996
*
6YTF|1|3|G|1038
6YTF|1|3|A|1039
6YTF|1|3|U|1040
6YTF|1|3|A|1041
Current chains
- Chain 3
- 16S ribosomal RNA
Nearby chains
No other chains within 10ÅColoring options: