IL_6Z1P_025
3D structure
- PDB id
- 6Z1P (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the mitochondrial ribosome from Tetrahymena thermophila
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.7 Å
Loop
- Sequence
- GUAG*CAUC
- Length
- 8 nucleotides
- Bulged bases
- 6Z1P|1|Ab|A|925
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6Z1P_025 not in the Motif Atlas
- Homologous match to IL_6PRV_001
- Geometric discrepancy: 0.2305
- The information below is about IL_6PRV_001
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_28482.1
- Basepair signature
- cWW-L-R-L-cWW
- Number of instances in this motif group
- 4
Unit IDs
6Z1P|1|Ab|G|923
6Z1P|1|Ab|U|924
6Z1P|1|Ab|A|925
6Z1P|1|Ab|G|926
*
6Z1P|1|Ab|C|940
6Z1P|1|Ab|A|941
6Z1P|1|Ab|U|942
6Z1P|1|Ab|C|943
Current chains
- Chain Ab
- LSU rRNA_2
Nearby chains
- Chain AN
- mL54
- Chain Am
- Ymf74
- Chain An
- Ribosomal protein L11, amine-terminal domain protein
- Chain Ar
- Ribosomal protein L16
Coloring options: