IL_6Z1P_130
3D structure
- PDB id
- 6Z1P (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the mitochondrial ribosome from Tetrahymena thermophila
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.7 Å
Loop
- Sequence
- GACG*CAAACC
- Length
- 10 nucleotides
- Bulged bases
- 6Z1P|1|Bb|C|1269, 6Z1P|1|Bb|A|1292, 6Z1P|1|Bb|C|1293
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6Z1P_130 not in the Motif Atlas
- Homologous match to IL_5J7L_055
- Geometric discrepancy: 0.301
- The information below is about IL_5J7L_055
- Detailed Annotation
- 180 degree turn
- Broad Annotation
- No text annotation
- Motif group
- IL_11344.2
- Basepair signature
- cWW-cSS-L-cWW
- Number of instances in this motif group
- 2
Unit IDs
6Z1P|1|Bb|G|1267
6Z1P|1|Bb|A|1268
6Z1P|1|Bb|C|1269
6Z1P|1|Bb|G|1270
*
6Z1P|1|Bb|C|1289
6Z1P|1|Bb|A|1290
6Z1P|1|Bb|A|1291
6Z1P|1|Bb|A|1292
6Z1P|1|Bb|C|1293
6Z1P|1|Bb|C|1294
Current chains
- Chain Bb
- SSU rRNA_2
Nearby chains
- Chain BA
- Ribosomal subunit protein
- Chain BX
- Ribosomal protein S3
- Chain Bj
- Ymf59
- Chain Bn
- Ribosomal protein S14
- Chain Bx
- mS31
- Chain By
- mS33
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