IL_6ZCE_011
3D structure
- PDB id
- 6ZCE (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of a yeast ABCE1-bound 43S pre-initiation complex
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 5.3 Å
Loop
- Sequence
- GUAUAAC*GCUAAUAC
- Length
- 15 nucleotides
- Bulged bases
- 6ZCE|1|A|U|170
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6ZCE_011 not in the Motif Atlas
- Homologous match to IL_4V88_394
- Geometric discrepancy: 0.1668
- The information below is about IL_4V88_394
- Detailed Annotation
- tWH-tWH-tHW-tHW
- Broad Annotation
- No text annotation
- Motif group
- IL_80604.3
- Basepair signature
- cWW-cWW-tWH-tWH-tHW-L-R-cWW
- Number of instances in this motif group
- 4
Unit IDs
6ZCE|1|A|G|143
6ZCE|1|A|U|144
6ZCE|1|A|A|145
6ZCE|1|A|U|146
6ZCE|1|A|A|147
6ZCE|1|A|A|148
6ZCE|1|A|C|149
*
6ZCE|1|A|G|165
6ZCE|1|A|C|166
6ZCE|1|A|U|167
6ZCE|1|A|A|168
6ZCE|1|A|A|169
6ZCE|1|A|U|170
6ZCE|1|A|A|171
6ZCE|1|A|C|172
Current chains
- Chain A
- 18S ribosomal RNA (1719-MER)
Nearby chains
- Chain H
- 40S ribosomal protein S6-A
- Chain Z
- 40S ribosomal protein S24-A
Coloring options: