IL_6ZCE_042
3D structure
- PDB id
- 6ZCE (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of a yeast ABCE1-bound 43S pre-initiation complex
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 5.3 Å
Loop
- Sequence
- GAAAAAAUU*AUAUUAGC
- Length
- 17 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6ZCE_042 not in the Motif Atlas
- Homologous match to IL_4V88_425
- Geometric discrepancy: 0.3807
- The information below is about IL_4V88_425
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_53064.1
- Basepair signature
- cWW-cWW-L-R-L-R-L-R-L-R-L-cWW-L
- Number of instances in this motif group
- 2
Unit IDs
6ZCE|1|A|G|751
6ZCE|1|A|A|752
6ZCE|1|A|A|753
6ZCE|1|A|A|754
6ZCE|1|A|A|755
6ZCE|1|A|A|756
6ZCE|1|A|A|757
6ZCE|1|A|U|758
6ZCE|1|A|U|759
*
6ZCE|1|A|A|791
6ZCE|1|A|U|792
6ZCE|1|A|A|793
6ZCE|1|A|U|794
6ZCE|1|A|U|795
6ZCE|1|A|A|796
6ZCE|1|A|G|797
6ZCE|1|A|C|798
Current chains
- Chain A
- 18S ribosomal RNA (1719-MER)
Nearby chains
- Chain F
- 40S ribosomal protein S4-A
- Chain K
- 40S ribosomal protein S9-A
- Chain M
- 40S ribosomal protein S11-A
Coloring options: