IL_6ZCE_044
3D structure
- PDB id
- 6ZCE (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of a yeast ABCE1-bound 43S pre-initiation complex
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 5.3 Å
Loop
- Sequence
- AG*CAUU
- Length
- 6 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6ZCE_044 not in the Motif Atlas
- Geometric match to IL_6N5P_003
- Geometric discrepancy: 0.1468
- The information below is about IL_6N5P_003
- Detailed Annotation
- Major groove platform; stack outside cWW
- Broad Annotation
- No text annotation
- Motif group
- IL_50694.7
- Basepair signature
- cWW-tSH-cWW-L
- Number of instances in this motif group
- 27
Unit IDs
6ZCE|1|A|A|865
6ZCE|1|A|G|866
*
6ZCE|1|A|C|962
6ZCE|1|A|A|963
6ZCE|1|A|U|964
6ZCE|1|A|U|965
Current chains
- Chain A
- 18S ribosomal RNA (1719-MER)
Nearby chains
- Chain O
- 40S ribosomal protein S13
- Chain X
- 40S ribosomal protein S22-A
- Chain c
- 40S ribosomal protein S27-A
Coloring options: