IL_6ZCE_082
3D structure
- PDB id
- 6ZCE (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of a yeast ABCE1-bound 43S pre-initiation complex
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 5.3 Å
Loop
- Sequence
- CGCU*AAAAG
- Length
- 9 nucleotides
- Bulged bases
- 6ZCE|1|A|A|1755, 6ZCE|1|A|A|1756
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6ZCE_082 not in the Motif Atlas
- Homologous match to IL_8CRE_469
- Geometric discrepancy: 0.3872
- The information below is about IL_8CRE_469
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_11399.2
- Basepair signature
- cWW-cHW-L-R-L-cWW
- Number of instances in this motif group
- 3
Unit IDs
6ZCE|1|A|C|1644
6ZCE|1|A|G|1645
6ZCE|1|A|C|1646
6ZCE|1|A|U|1647
*
6ZCE|1|A|A|1753
6ZCE|1|A|A|1754
6ZCE|1|A|A|1755
6ZCE|1|A|A|1756
6ZCE|1|A|G|1757
Current chains
- Chain A
- 18S ribosomal RNA (1719-MER)
Nearby chains
- Chain Y
- 40S ribosomal protein S23-A
- Chain i
- Eukaryotic translation initiation factor 1A
- Chain m
- Eukaryotic translation initiation factor eIF-1
Coloring options: