IL_6ZM5_013
3D structure
- PDB id
- 6ZM5 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Human mitochondrial ribosome in complex with OXA1L, mRNA, A/A tRNA, P/P tRNA and nascent polypeptide
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.89 Å
Loop
- Sequence
- GAG*CUACC
- Length
- 8 nucleotides
- Bulged bases
- 6ZM5|1|A|A|1986, 6ZM5|1|A|U|1998, 6ZM5|1|A|A|1999, 6ZM5|1|A|C|2000
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6ZM5_013 not in the Motif Atlas
- Geometric match to IL_5J7L_265
- Geometric discrepancy: 0.0869
- The information below is about IL_5J7L_265
- Detailed Annotation
- Multiple bulged bases
- Broad Annotation
- No text annotation
- Motif group
- IL_06549.2
- Basepair signature
- cWW-cWW
- Number of instances in this motif group
- 6
Unit IDs
6ZM5|1|A|G|1985
6ZM5|1|A|A|1986
6ZM5|1|A|G|1987
*
6ZM5|1|A|C|1997
6ZM5|1|A|U|1998
6ZM5|1|A|A|1999
6ZM5|1|A|C|2000
6ZM5|1|A|C|2001
Current chains
- Chain A
- 16S mitochondrial rRNA
Nearby chains
- Chain 2
- 39S ribosomal protein L34, mitochondrial
- Chain D
- 39S ribosomal protein L2, mitochondrial
- Chain F
- 39S ribosomal protein L4, mitochondrial
- Chain T
- 39S ribosomal protein L22, mitochondrial
- Chain X
- 39S ribosomal protein L28, mitochondrial
- Chain v
- Nascent polypeptide
Coloring options: