IL_6ZM5_084
3D structure
- PDB id
- 6ZM5 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Human mitochondrial ribosome in complex with OXA1L, mRNA, A/A tRNA, P/P tRNA and nascent polypeptide
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.89 Å
Loop
- Sequence
- AUAUC*GCCCU
- Length
- 10 nucleotides
- Bulged bases
- 6ZM5|1|AA|A|1188
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6ZM5_084 not in the Motif Atlas
- Geometric match to IL_8HNT_002
- Geometric discrepancy: 0.2322
- The information below is about IL_8HNT_002
- Detailed Annotation
- C-loop
- Broad Annotation
- No text annotation
- Motif group
- IL_63596.13
- Basepair signature
- cWW-cWS-cSH-tWH-cWW-L
- Number of instances in this motif group
- 23
Unit IDs
6ZM5|1|AA|A|1186
6ZM5|1|AA|U|1187
6ZM5|1|AA|A|1188
6ZM5|1|AA|U|1189
6ZM5|1|AA|C|1190
*
6ZM5|1|AA|G|1464
6ZM5|1|AA|C|1465
6ZM5|1|AA|C|1466
6ZM5|1|AA|C|1467
6ZM5|1|AA|U|1468
Current chains
- Chain AA
- 12S mitochondrial rRNA
Nearby chains
- Chain A2
- Coiled-coil-helix-coiled-coil-helix domain-containing protein 1
- Chain AF
- 28S ribosomal protein S7, mitochondrial
- Chain AG
- 28S ribosomal protein S9, mitochondrial
- Chain y
- mRNA
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